Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Dev merge #322

Merged
merged 267 commits into from
Aug 2, 2022
Merged

Dev merge #322

merged 267 commits into from
Aug 2, 2022

Conversation

tensionhead
Copy link
Contributor

No description provided.

tensionhead and others added 30 commits June 21, 2022 12:07
- 'angle' was completely missing
- some minor doc tweaks

On branch issue292
Changes to be committed:
	modified:   syncopy/nwanalysis/connectivity_analysis.py
	modified:   syncopy/nwanalysis/csd.py
	modified:   syncopy/shared/const_def.py
	modified:   syncopy/tests/test_connectivity.py
CHG: FT compatibility for coherence outputs
- first ideas how to attach additional data to the hdf5

On branch 140-multiple-outputs
Changes to be committed:
	modified:   syncopy/shared/kwarg_decorators.py
On branch 140-multiple-outputs
Changes to be committed:
	modified:   syncopy/shared/kwarg_decorators.py
- with this, users see the option being available by inspecting the
signature and/or docstring

Changes to be committed:
	modified:   syncopy/io/utils.py
…an-option-for-non-interactive-snpcleanup

297 providing the user an option for non interactive cleanup
- all h5py reading and writing should be done within this decorator
- already the case for parallel processing
- TODO: move sequential part also into this decorator

Changes to be committed:
	modified:   syncopy/datatype/methods/arithmetic.py
	modified:   syncopy/datatype/methods/padding.py
	modified:   syncopy/datatype/methods/selectdata.py
	modified:   syncopy/nwanalysis/AV_compRoutines.py
	modified:   syncopy/nwanalysis/ST_compRoutines.py
	modified:   syncopy/preproc/compRoutines.py
	modified:   syncopy/shared/computational_routine.py
	modified:   syncopy/shared/kwarg_decorators.py
	modified:   syncopy/specest/compRoutines.py
	modified:   syncopy/tests/test_computationalroutine.py
- removed the comment-like return value

Changes to be committed:
	modified:   syncopy/shared/kwarg_decorators.py
Changes to be committed:
	modified:   syncopy/specest/compRoutines.py
	modified:   syncopy/tests/local_spy.py
tensionhead and others added 29 commits July 25, 2022 17:19
Changes to be committed:
	modified:   doc/source/quickstart/quickstart.rst
	modified:   doc/source/tutorials/fooof.rst
Changes to be committed:
	modified:   doc/source/tutorials/fooof.rst
Changes to be committed:
	modified:   syncopy/tests/test_specest_fooof.py
- dicts are quite flexible..

Changes to be committed:
	modified:   syncopy/shared/tools.py
…mpty_spikedata

FIX: prevent error on init of SpikeData with empty ndarray
…-container

NEW: auxiliary meta info container
- build and upload to test.pypi.org worked
- poetry is a bit fiddely with the used python version (but only acme pins with <3.9)
- TODO: test pip install from the test.pypi.org index

Changes to be committed:
	deleted:    conda2pip.py
	new file:   poetry.lock
	modified:   pyproject.toml
	deleted:    setup.cfg
- added readme, homepage, pypi classifiers and packaged the license
- apparently poetry publish fails silently if pypi does not like the
version string
…m-to-poetry

318 migrate build system to poetry
- there was still a 'vdata' hanging around

Changes to be committed:
	modified:   syncopy/tests/test_specest.py
- FT does it this way, and we could see some subtle differences for
real data

Changes to be committed:
	modified:   CHANGELOG.md
	modified:   syncopy/nwanalysis/connectivity_analysis.py
- introducing new infoFileProperties did break the loading
of older Syncopy containers

Changes to be committed:
	modified:   syncopy/io/load_spy_container.py
- use less samples and smaller sliding windows to reduce data size
- additionally tune down tapsmofrq to reduce tapers used

Changes to be committed:
	modified:   syncopy/tests/test_specest.py
@tensionhead tensionhead merged commit 6e17c3a into psth Aug 2, 2022
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

2 participants